Publications

Featuring ACGG student authors from JLU, UQ, JKI and HGU

2025

Weber SE, Roscher-Ehrig L, Zanini S, Yildiz G, Abbadi A, Kox T, Golicz A, Snowdon RJ (2025) Single-cross prediction with imputed multi-omic data: A case study in rapeseed. Genome. https://doi.org/10.1139/gen-2025-0010
Neitzert L, Kravcov N, Wittkop B, Snowdon RJ, Windpassinger S (2025) Reproductive Cold Stress in Contrasting Sorghum Genotypes: Is Pollen Fertility Really the Crucial Trait?. Plant Direct 9:e70065. https://doi.org/10.1002/pld3.70065
Augustine S, Cherian A, Paridhi P, Ugwuanyi S, Rashid M, Knoblauch B, Tzigos S, Pullamsetti S, Snowdon RJ (2025) Electrical Current-Mediated Transformation for Efficient Plant Genome Editing: A Case Study in Faba Bean. Legume Science 7:e70031 https://doi.org/10.1002/leg3.70031
Yildiz G, Zanini SF, Weber SE, Kopalli V, Kox T, Abbadi A, Snowdon RJ, Golicz AA (2025) Graphical pangenomics-enabled characterization of structural variant impact on gene expression in Brassica napus. Theor Appl Genet 138:91
Ugwuanyi S, Tietgen H, Makhoul M, Obermeier C, Snowdon RJ (2025) Novel gene-copy-specific KASP Markers for efficient marker-assisted development of low vicine faba bean (Vicia faba L.). Plant Breed. https://doi.org/10.1111/pbr.13276

2024

Moritz A, Eckert A, Vukasovic S, Snowdon R, Stahl A (2024) Physiological phenotyping of transpiration response to vapour pressure deficit in wheat. BMC Plant Biology 24:1032. doi: 10.1186/s12870-024-05692-3.
Mikwa E, Wittkop B, Windpassinger SM, Weber SE, Ehrhardt D, Snowdon RJ (2024) Early exposure to phosphorus starvation induces genetically determined responses in Sorghum bicolor roots. Theor Appl Genet 137: 220, https://doi.org/10.1007/s00122-024-04728-4
Töpfer V, Melzer M, Snowdon RJ, Stahl A, Matros A, Wehner G (2024) PEG treatment is unsuitable to study root related traits as it alters root anatomy in barley (Hordeum vulgare L.). BMC Plant Biol 24: 856, https://doi.org/10.1186/s12870-024-05529-z
Montero-Tena JA, Abdollahi Sisi N, Kox T, Abbadi A, Snowdon RJ, Golicz AA (2024) haploMAGIC: accurate phasing and detection of recombination in multiparental populations despite genotyping errors. G3 14, https://doi.org/10.1093/g3journal/jkae109
Roscher-Ehrig L, Weber SE, Abbadi A, Malenica M, Abel S, Hemker R, Snowdon RJ, Wittkop B, Stahl A (2024) Phenomic selection for hybrid rapeseed breeding. Plant Phenomics, https://spj.science.org/doi/full/10.34133/plantphenomics.0215
Kang Y, Alahmad S, Van Haeften S, Akinlade O, Tong J, Dinglasan E, Voss-Fels KP, Potgieter AB, Borrell AK, Makhoul M, Obermeier C, Snowdon R, Mace E, Jordan DR, Hickey LT (2024) Mapping quantitative trait loci for seminal root angle in a selected durum wheat population. The Plant Genome, doi.org/10.1002/tpg2.20490
Makhoul M, Schlichtermann R, Ugwuanyi S, Weber SE, Voss-Fels KP, Stahl A, Zetzsche H, Wittkop B, Snowdon RJ, Obermeier C (2024) Novel PHOTOPERIOD-1 gene variants associate with yield-related and root-angle traits in European bread wheat. Theor Appl Genet 137, 125. https://doi.org/10.1007/s00122-024-04634-9
Weber S, Roscher-Ehrig L, Kox T, Abbadi A, Werner CR, Stahl A, Snowdon RJ (2024) Genomic prediction in Brassica napus: Evaluating the benefit of imputed whole-genome sequencing data. Genome, accepted
Vukasovic S, Eckert AH, Moritz AL, Borsch C, Rudloff S, Snowdon RJ, Stahl A (2024) Effect of a QTL on wheat chromosome 5B associated with enhanced root dry mass on transpiration and nitrogen uptake under contrasting drought scenarios in wheat. BMC Plant Biol 24:83, https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-024-04756-8

2023

Weber SE, Chawla HS, Ehrig L, Hickey LT, Frisch M, Snowdon RJ 2023) Accurate prediction of quantitative traits with failed SNP calls in canola and maize. Front Plant Sci 14, https://www.frontiersin.org/articles/10.3389/fpls.2023.1221750
Weber SE, Frisch M, Snowdon RJ, Voss-Fels KP (2023) Haplotype blocks for genomic prediction: a comparative evaluation in multiple crop datasets. Front Plant Sci 14, https://www.frontiersin.org/articles/10.3389/fpls.2023.1217589
Difabachew YF, Frisch M, Langstroff AL, Stahl A, Wittkop B, Snowdon RJ, Koch M, Kirchhoff M, Cselényi L, Wolf M, Förster J, Weber S, Okoye UJ, Zenke-Philippi C (2023) Genomic prediction with haplotype blocks in wheat. Front Plant Sci 14: 1168547. doi: 10.3389/fpls.2023.1168547
Yildiz G, Zanini S, Afsharyan N, Obermeier C, Snowdon R, Golicz A (2023) Benchmarking Oxford Nanopore read alignment-based structural variant detection tools in crop plant genomes. The Plant Genome e20314, https://doi.org/10.1002/tpg2.20314
Tovignan TK, Basha Y, Windpassinger S, Augustine SM, Snowdon R, Vukasovic S (2023) Agronomy 13: 722, https://doi.org/10.3390/agronomy13030722